O.P. showed a pic of the shed, he has made his coop out of. From what I get from his description, of what he's got, the end wall to the left of the double doors, faces north. He could, as I posted before, cut the lower half from the south facing wall, and cover it with hardware cloth. He would have to move the nestboxes, no problem to do that. He would not have to mess around/cut any more holes. In the summer/warmer months, he would open everything, windows, hook open double doors, and have hardware cloth screen doors for the opening. That, combined with the open front, the birds would have all kinds of fresh air/ventilation. In the winter, close double doors, and shut the other windows. With a coop depth of 12', I don't care from where the wind blows, the birds would not suffer from any draft. It basically a tight building. The wind will not penetrate to the back of that coop.
Depending on how many birds he keeps in there, he may have to crack one of those windows open. In my coop (Woods), with 20-25 layers in there, I have cracked open the upper monitor windows in the winter. If the temp gets much over 30F, I've noticed it can get a touch foul in there. Crack open the upper windows a couple of inches, and it freshens right up. And, there's still no draft of any kind to worry about.